Our community of faculty scholars engage in interdisciplinary research that focuses on real world problems and lays the groundwork for the innovations of tomorrow that can improve the lives and the livelihood of people around the world. Their research generates the knowledge and understanding needed for a better society, and it strengthens our teaching mission by enriching our students' learning experience in and out of the classroom. We encourage you to further explore our featured undergraduate research work.
The 10 featured or most recent scholarship and patent listings are displayed for each faculty member listed below.
Chapman, Mark
Books
- With Sundberg CJ, Exercise, Gene Regulation and Cardiometabolic Disease.. Editors: P. Kokkinos and P. Narayan, Cham, Switzerland, : Springer Nature Switzerland, 2019.
Journal Articles
- With Reitzner SM, Emanuelsson EB, Arif M, Kaczkowski B, and Kwon AT, "Molecular profiling of high-level athlete skeletal muscle after acute endurance or resistance exercise - A systems biology approach.," Biotechnology and Bioengineering, 2024.
- With Emanuelsson, EB, Arif, M, Reitzner, SM, Perez, S, and Lindholm, ME, "Remodeling of the human skeletal muscle proteome found after long-term endurance training but not after strength training.," Biotechnology and Bioengineering, 2024.
- With August Lundquist, Nan S Han, Eric B Emanuelssan, and Stefan M Reitzner, "FiNuTyper: Design and validation of an automated deep learning-based platform for simultaneous fiber and nucleus type analysis in human skeletal muscle," Acta Biomaterialia, 239, 2023.
- With Arif M, Emanuelsson EB, Reitzner SM, Lindholm ME, Mardinoglu A, and Sundberg CJ, "Skeletal muscle transcriptomic comparison between long-term trained and untrained men and women.," Cell Reports, vol. 31, 2020.
- With Mijwel S, Cardinale DA, Norrbom J, Ivarsson N, Wengstrm Y, Sundberg CJ, and Rundqvist H, "Exercise training during chemotherapy preserves skeletal muscle fiber area, capillarization, and mitochondrial content in patients with breast cancer.," The FASEB Journal, vol. 32, pp. 5495-5505, 2018.
- With 4. Gillies AR, Bushong EA, Deerinck TJ, Ellisman MH, and Lieber RL, "High resolution three-dimensional reconstruction of fibrotic skeletal muscle extracellular matrix.," The Journal of Physiology, vol. 595, 4, pp. 1159-1171, 2017.
- With Mukund K, Subramaniam S, Brenner D, and Lieber RL, "Three distinct cell populations express extracellular matrix proteins and increase in number during skeletal muscle fibrosis," American Journal of Physiology - Cell Physiology, vol. 312, pp. C131-143, 2017.
- With Meza R and Lieber RL, "Fibroblasts in skeletal muscle health and disease.," Differentiation, vol. 92, 3, pp. 108-115, 2016.
- With Pichika R and Lieber RL, "Collagen crosslinking does not dictate stiffness in a transgenic mouse model of skeletal muscle fibrosis.," Journal of Biomechanics, vol. 48, 2, pp. 375-378, 2015.
- With Zhang J, Banerjee I, Gou LT, Zhang Z, Shelton DG, Ouyang K, Lieber RL, and Chen J, "Disruption of both Nesprin 1 and Desmin results in nuclear anchorage defects and fibrosis in skeletal muscle.," Human Molecular Genetics, vol. 23, 22, pp. 5879-5892, 2014.
- With Mathewson MA, Hentzen ER, Frid￩n J, and Lieber RL, "Anatomical, architectural, and biochemical diversity of the murine forelimb muscles.," Journal of Anatomy, vol. 221, 5, pp. 443-51, 2012.
- With Kostal V, Levar K, Swift M, Skillrud E, Thompson LV, and Arriaga EA, "Semi-automated image analysis: detecting carbonylation in subcellular regions of skeletal muscle.," Analytical and Bioanalytical Chemistry, vol. 400, 1, pp. 213-22, 2011.
- With Geeslin AG, Jansson KS, Wijdicks CA, Fok AS, and LaPrade RF, "Tibial tunnel aperture irregularity after drilling with 5 reamer designs: a qualitative micro-computed tomography analysis.," American Journal of Sports Medicine, vol. 39, 4, pp. 825-31, 2011.
Conference Papers and Other Media
- With Arif, M, Emanuelsson, E, Reitzner, SM, Lindholm, ME, Mardinoglu, A, and Sundberg, CJ, "Skeletal muscle transcriptomic comparison between long-term trained and untrained men and women.." Keystone Symposia Conference: New Insights into the Biology of Exercise, Keystone, CO, 2020.
- With Arif, M, Emanuelsson, E, Reitzner, SM, Lindholm, ME, Mardinoglu, A, and Sundberg, CJ, "Genome-scale mechanisms of metabolic adaptation in long-term exercise trained humans.." Cell Symposium: Exercise Metabolism, Sitges, Spain, 2019.
- With Sundberg, CJ, "Investigation of human myonuclear turnover by radiocarbon dating and mathematical modeling.." Whitaker Enrichment Seminar, Lisbon, Portugal, 2017.
- With Mukund, K, Subramaniam, S, Brenner, D, and Lieber, RL, "Multiple specific cell types produce type-I collagen during skeletal muscle fibrosis.." Experimental Biology, San Diego, CA, 2016.
- With Lieber, RL, "Multiple specific cell types produce type-I collagen during skeletal muscle fibrosis.." Orthopaedic Research Society Meeting, Orlando, FL, 2016.
- With Lieber, RL, "Identification of collagen producing cells in a model of chronic skeletal muscle fibrosis.." American Collagen of Sports Medicine, San Diego, CA, 2015.
- With Zhang J,, Chen, J, and Lieber, RL, "Dual ablation of nesprin 1 and desmin alters nuclear anchorage, causes aberrant nuclear mechanics and results in fibrosis in skeletal muscle.." Orthopaedic Research Society Meeting, New Orleans, LA, 2014.
- With Lieber, RL, "Identification of collagen producing cells in a model of chronic skeletal muscle fibrosis.." Alternative Muscle Club Meeting, San Diego, CA, 2014.
- With Zhang, J, Chen, J, and Lieber, RL, "Knockout of nesprin 1 and desmin causes aberrant nuclear mechanics and fibrosis in skeletal muscle.." Cellular and Molecular Bioengineering Conference, La Jolla, CA, 2014.
- With Zhang, J, Chen, J, and Lieber, RL, "Knockout of nesprin 1 and desmin causes aberrant nuclear mechanics and fibrosis in skeletal muscle.." Alternative Muscle Club Meeting, San Diego, CA, 2013.
- With Mathewson, MA, Yamaguchi, T, Naiki, M, Masuda, K, and Lieber, RL, "Alterations in the mechanical properties of the multifidus muscle in response to pain.." Orthopedic Research Society Meeting, San Francisco, CA, 2012.
Media Appearances and Conferences
- With Mejia, JA and Chen, DA, "Engineering as a challenging vocation: How students align personal values to the dominant engineering discourse.," American Society for Engineering Education (ASEE) Annual Conference, Montr￩al, Quebec, 2020.
- With Cornwall, GB, "Work in Progress: Direct incorporation of research articles into undergraduate biomedical engineering courses to contextualize complex topics.," American Society for Engineering Education (ASEE) Annual Conference, Montr￩al, Quebec, 2020.
- With Hoople, GD and Cornwall, GB , "Work in Progress: Development of a Biomedical Engineering Concentration Area within an Integrated Engineering Major Emphasizing Sociotechnical Thinking.," American Society for Engineering Education (ASEE) Annual Conference, Tampa, FL, 2019.
- With Emanuelsson, E and Sundberg, CJ, "Genome-scale mechanisms of adaptation in long-term exercise trained humans.," Whitaker Enrichment Seminar, Budapest, Hungary, 2018.
- With Lieber, RL, "Identification of collagen producing cells in a model of chronic skeletal muscle fibrosis.," International Biochemistry of Exercise, S￣o Paulo, Brazil, 2015.
- With Pichika, R and Lieber, RL, "Collagen crosslinking does not dictate stiffness in a transgenic mouse model of skeletal muscle fibrosis.," 25th Congress of the International Society of Biomechanics, Glasgow, United Kindgom, 2015.
- With Zhang, J, Chen, J, and Lieber, RL, "Knockout of nesprin 1 and desmin causes aberrant nuclear mechanics and fibrosis in skeletal muscle.," Biomedical Engineering Society Meeting, Seattle, WA, 2013.
- With Zhang, J, Chen, J, and Lieber, RL, "Knockout of both nesprin 1 and desmin results in aberrant nuclear mechanics and fibrosis in murine skeletal muscle.," 24th Congress of the International Society of Biomechanics, Natal, Brazil, 2013.